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    DOI10.15468/wem7un

    Sampling event Registered February 19, 2020

    Soil bacterial communities (Hainich National Park)

    Published by MGnify
    www.ebi.ac.uk
    LicenceCC BY 4.0

    Description

    This study focuses on the influence of tree species composition, soil properties and seasonality on the structure of soil bacterial communities by employing high-throughput sequencing of the 16SrRNA gene. Soil cores were collected from bulk soil (0 - 5 cm depth) within eight tree clusters containing mono-species (beech, horn, lime and oak) and mixed-species (BOH, BOL, BHL and OHL) stands during Spring, Summer and Autumn 2012.

    Methodology

    Sampling

    This study focuses on the influence of tree species composition, soil properties and seasonality on the structure of soil bacterial communities by employing high-throughput sequencing of the 16SrRNA gene. Soil cores were collected from bulk soil (0 - 5 cm depth) within eight tree clusters containing mono-species (beech, horn, lime and oak) and mixed-species (BOH, BOL, BHL and OHL) stands during Spring, Summer and Autumn 2012.

    Method steps

    1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

    Bibliography

    • Dukunde A, Schneider D, Schmidt M, Veldkamp E, Daniel R. 2019. Tree Species Shape Soil Bacterial Community Structure and Function in Temperate Deciduous Forests. Front Microbiol vol. 10
      Identifier: DOI:10.3389/fmicb.2019.01519Google Scholar

    Contacts

    • Institute of Microbiology and Genetics

      Originator
      Metadata author
      Administrative point of contact
      Organization
      Institute of Microbiology and Genetics
      Roles
      Originator
      Metadata author
      Administrative point of contact

    GBIF registration

    Registration date
    February 19, 2020
    Metadata last modified
    June 18, 2021
    Publication date
    June 21, 2020
    Hosted by
    GBIF Secretariat
    Installation
    GBIF Hosted Datasets
    Endpoints
    Darwin Core Archive
    Preferred identifier
    10.15468/wem7un
    Alternative identifiers
    GBIF registration details

    Citation

    MGnify (2020). Soil bacterial communities (Hainich National Park). Sampling event dataset https://doi.org/10.15468/wem7un accessed via GBIF.org on 2025-08-03.