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    Specimen Nov 15, 2021

    Methanomassiliicoccales

    ColombiaSantanderPuerto Wilches
    Terraplen
    Sequenced

    Record

    Dataset
    Eucaria identificada por medio de metabarcoding asociada al proyecto piloto de investigación integral - PPII Platero, departamento de Santander
    Basis of record
    Material sample

    Taxon

    Scientific name
    Methanomassiliicoccales
    Higher classification
    d__Archaea | p__Thermoplasmatota | c__Thermoplasmata | o__Methanomassiliicoccales | f__uncultured | g__uncultured | s__uncultured_archaeon
    Kingdom
    Archaea
    Phylum
    Thermoplasmatota
    Class
    Thermoplasmata
    Order
    Methanomassiliicoccales
    Rank
    Orden
    Taxonomic status
    Aceptado
    GBIF Backbone Taxonomy

    Methanomassiliicoccales

    KingdomArchaeaPhylumThermoplasmatotaClassThermoplasmataOrderMethanomassiliicoccales
    Catalogue of Life

    Methanomassiliicoccales Iino et al., 2013

    DomainArchaeaKingdomMethanobacteriatiPhylumMethanobacteriotaClassThermoplasmataOrderMethanomassiliicoccales
    Date identified
    2021-08-31

    Location

    Continent
    South America
    Altered
    América del Sur
    original
    Country or area
    Colombia
    Water body
    Río Magdalena
    State province
    Santander
    County
    Puerto Wilches
    Locality
    Terraplen
    Decimal latitude
    7.257
    Decimal longitude
    -73.917
    Verbatim coordinate system
    Coordenadas proyectadas
    Verbatim SRS
    MAGNA-SIRGAS origen CTM-12
    Elevation
    67
    Inferred
    Elevation accuracy
    0
    Inferred
    Verbatim elevation
    67
    Depth
    0.15
    Inferred
    Depth accuracy
    0.15
    Inferred
    Verbatim depth
    0.3
    Geodetic datum
    WGS84
    Verbatim latitude
    2360027.374
    Verbatim longitude
    4898822.909
    Location according to GADM
    ColombiaSantanderPuerto Wilches
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    Occurrence

    Occurrence ID
    Ecopetrol:Platero_cap-3:0151843
    Recorded by
    • SGI SAS
    Organism quantity
    46
    Organism quantity type
    DNA sequence reads
    Sex
    Occurrence status
    Present
    Event ID
    cap-3_18S_Sedimento
    Parent event ID
    cap-3
    Event date
    2021-11-15
    Event time
    9:00
    Verbatim event date
    2021/11/15 00:00:00
    Habitat
    Ríos
    Sampling protocol
    • Se tomó una muestra lo largo del transecto. Se realizó un proceso de metabarcoding a la muestra tomada
    Sampling effort
    1 kg
    Sample size value
    268
    Sample size unit
    DNA sequence reads
    Event remarks
    Temporada Húmeda | Número de lecturas totales de la muestra posterior a la depuración bioinformática: 13
    Material sample ID
    9374b8a4b413b9eff9ff5c637018365a

    Other

    Record licence
    CC BY-NC 4.0
    Inferred
    Institution code
    Ecopetrol S.A.
    Institution match none
    Institution ID
    899.999.068-1
    Institution match none
    Dataset name
    • EIA PPII - PLATERO sobre YNC
    Identifier
    Ecopetrol:Platero_cap-3:0151843
    GBIF ID
    5086191908

    Preservation

    Preservation type
    Congelación

    DNA derived data

    0000014
    sediment[ENVO_00002007]
    0000058
    Python version: 3.6.13; QIIME 2 release: 2021.2; QIIME 2 version: 2021.2.0; q2cli version: 2021.2.0
    0000001
    1 Kg para preservar en campo/500mg para extraccion
    0000045
    V9-F
    0000087
    NCBI nr Release 243, abril 15 de 2021
    0000044
    18S
    0000085
    98%
    0000041
    single
    0000050
    MiSeq (Illumina)
    pcr_primer_name_reverse
    18S-V9-R
    occurrenceID
    Ecopetrol:Platero_cap-3:0151843
    pcr_primer_forward
    CCCTGCCHTTTGTACACAC
    pcr_primer_name_forward
    18S-V9-F
    pcr_primer_reverse
    CCTTCYGCAGGTTCACCTAC

    Extended measurement or fact

    7 rows
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Measurement type
    Número de OTUs conformados
    Whether the record has geospatial issues.
    999
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Measurement type
    Porcentaje de OTUs asignados a categoría de especie
    Whether the record has geospatial issues.
    999
    Measurement unit
    Porcentaje
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843
    Measurement type
    Porcentaje de OTUs asignados a categoría de orden
    Whether the record has geospatial issues.
    999
    Measurement unit
    Porcentaje
    Occurrence id
    Ecopetrol:Platero_cap-3:0151843

    Citation

    Please use this citation in publications
    Ecopetrol S.A., SGI S.A.S CONSULTORIA E INGENIERIA (2025). Eucaria identificada por medio de metabarcoding asociada al proyecto piloto de investigación integral - PPII Platero, departamento de Santander. Version 1.2. Ecopetrol S.A.. Occurrence dataset https://doi.org/10.15472/esgkcr accessed via GBIF.org on 2025-08-08. https://gbif.org/occurrence/5086191908
    API access
    Dataset
    Eucaria identificada por medio de metabarcoding asociada al proyecto piloto de investigación integral - PPII Platero, departamento de Santander
    Publisher
    Ecopetrol S.A.
    Last crawled
    2025-07-10T18:18:54.192